BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A08LP1|AL426453
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1580 0.0
>3x_Contig1786
Length = 33838
Score = 1580 bits (797), Expect = 0.0
Identities = 803/805 (99%)
Strand = Plus / Minus
Query: 1 gatcatagtattgacttaccaaaagctctggagccaagtatgggtcgctaccaacaatgc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 29720 gatcatagtattgacttaccaaaagctctggagctaagtatgggtcgctaccaacaatgc 29661
Query: 61 ctttcgctttcactattttatcctcgtatttgtaatggaaaatggtagcgctaccaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29660 ctttcgctttcactattttatcctcgtatttgtaatggaaaatggtagcgctaccaaagt 29601
Query: 121 caatcaacttcaagataccttgagcattaacaacacagttgtctaacttcaaatctctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29600 caatcaacttcaagataccttgagcattaacaacacagttgtctaacttcaaatctctat 29541
Query: 181 gagccaatccttgagaatgtagatatgcaactccattacagatttgtttgaaatagcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29540 gagccaatccttgagaatgtagatatgcaactccattacagatttgtttgaaatagcatg 29481
Query: 241 cgatttcatgctttcccattagatcactcataaccaatgtgaagaaatcatactgacaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29480 cgatttcatgctttcccattagatcactcataaccaatgtgaagaaatcatactgacaat 29421
Query: 301 attccattactaccaaaaaatgctctccctcttgtagcatatccaaggtttcgataacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29420 attccattactaccaaaaaatgctctccctcttgtagcatatccaaggtttcgataacgt 29361
Query: 361 tctgatgatgcaaaaacgatcctacacaaaattcagacgtaacttttttagaataatcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29360 tctgatgatgcaaaaacgatcctacacaaaattcagacgtaacttttttagaataatcca 29301
Query: 421 acaaggtctctctagcagctcttggtctgaattttttcactgcaaacaaagtgttatccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29300 acaaggtctctctagcagctcttggtctgaattttttcactgcaaacaaagtgttatccg 29241
Query: 481 aaccttttacaacacttacagatccagaaacaccttcgccgagaagtttccccggaatac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29240 aaccttttacaacacttacagatccagaaacaccttcgccgagaagtttccccggaatac 29181
Query: 541 catacttctgtatcaattcatgggcgtcttctgcgtcgtataaagtcaattttgtagttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29180 catacttctgtatcaattcatgggcgtcttctgcgtcgtataaagtcaattttgtagttt 29121
Query: 601 tacggtctgtaacgactgcggttgctgtcggttgtttttgttctacatgtttttgctctc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29120 tacggtctgtaacgactgcggttgctgtcggttgtttttgttctacatgtttttgctctc 29061
Query: 661 cggattgttcgtggagcttaaagaaccgtttcaaacggagtaatttcttgtgatggggtt 720
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 29060 cggattgttcgtggagcttaaagaaccgtttcaaacggagtgatttcttgtgatggggtt 29001
Query: 721 ttggatgggaattatcggccgatgataatttagggggtggttgcagcttaaattgttcga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29000 ttggatgggaattatcggccgatgataatttagggggtggttgcagcttaaattgttcga 28941
Query: 781 tttgtctctgaagatactctgcagg 805
|||||||||||||||||||||||||
Sbjct: 28940 tttgtctctgaagatactctgcagg 28916
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5834
Number of Sequences: 1807
Number of extensions: 5834
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)